The Tree:

Siphonohores…

Stochastic mapping plots

## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##             Dioeicous Monoeicous
## Dioeicous  -0.1793516  0.1793516
## Monoeicous  0.1793516 -0.1793516
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##  Dioeicous Monoeicous 
##        0.5        0.5
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##            0          1
## 0 -0.1735485  0.1735485
## 1  0.1735485 -0.1735485
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##   0   1 
## 0.5 0.5
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##           0         1
## 0 -0.177055  0.177055
## 1  0.177055 -0.177055
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##   0   1 
## 0.5 0.5
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##             0           1
## 0 -0.08597037  0.08597037
## 1  0.08597037 -0.08597037
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##   0   1 
## 0.5 0.5
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##             Dorsal        None     Ventral
## Dorsal  -0.1002369  0.00000000  0.10023688
## None     0.0000000 -0.09068517  0.09068517
## Ventral  0.1002369  0.09068517 -0.19092205
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##    Dorsal      None   Ventral 
## 0.3333333 0.3333333 0.3333333
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##                      Multiple of one type       None Two of one type
## Multiple of one type           -0.3263304  0.1120797       0.2142507
## None                            0.1120797 -0.1120797       0.0000000
## Two of one type                 0.2142507  0.0000000      -0.8536830
## Two of two types                0.0000000  0.0000000       0.6394323
##                      Two of two types
## Multiple of one type        0.0000000
## None                        0.0000000
## Two of one type             0.6394323
## Two of two types           -0.6394323
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
## Multiple of one type                 None      Two of one type 
##                 0.25                 0.25                 0.25 
##     Two of two types 
##                 0.25
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##             0           1
## 0 -0.08179357  0.08179357
## 1  0.08179357 -0.08179357
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##   0   1 
## 0.5 0.5
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##            0          1          2         4
## 0 -0.1873257  0.1873257  0.0000000  0.000000
## 1  0.1873257 -0.4879180  0.3005923  0.000000
## 2  0.0000000  0.3005923 -3.6251484  3.324556
## 4  0.0000000  0.0000000  3.3245561 -3.324556
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##    0    1    2    4 
## 0.25 0.25 0.25 0.25
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##              Bathypelagic Deep benthic Epipelagic Mesopelagic    Surface
## Bathypelagic   -0.7888097    0.4560825  0.0000000   0.3327272  0.0000000
## Deep benthic    0.4560825   -0.4560825  0.0000000   0.0000000  0.0000000
## Epipelagic      0.0000000    0.0000000 -1.6539459   0.7557412  0.8982047
## Mesopelagic     0.3327272    0.0000000  0.7557412  -1.0884683  0.0000000
## Surface         0.0000000    0.0000000  0.8982047   0.0000000 -0.8982047
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##          0.2          0.2          0.2          0.2          0.2

When we reconstruct the evolutionary history of sex distribution in siphonophore species, we obtain the following results:

make.simmap(ultratree, sex, nsim = 100)
## make.simmap is sampling character histories conditioned on the transition matrix
## 
## Q =
##             Dioeicous Monoeicous
## Dioeicous  -0.1793516  0.1793516
## Monoeicous  0.1793516 -0.1793516
## (estimated using likelihood);
## and (mean) root node prior probabilities
## pi =
##  Dioeicous Monoeicous 
##        0.5        0.5
## Done.
## 100 phylogenetic trees with mapped discrete characters

Sex distribution:

## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red" 
## no colors provided. using the following legend:
##  Dioeicous Monoeicous 
##    "black"      "red"

Presence of palpons:

## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red"

Presence of tentilla:

## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red"

Presence of Nectophores:

## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red"

Position of Nectosome:

## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3" 
## no colors provided. using the following legend:
##   Dorsal     None  Ventral 
##  "black"    "red" "green3"

Nectophore number and types:

## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue" 
## no colors provided. using the following legend:
## Multiple of one type                 None      Two of one type 
##              "black"                "red"             "green3" 
##     Two of two types 
##               "blue"

Presence of Pneumatophore:

## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red" 
## no colors provided. using the following legend:
##       0       1 
## "black"   "red"

Number of Bract types:

#Simmap bract-types
plotTree(ultratree, lwd = 4)
bracts_sim %>% plotSimmap(lwd = 4, add = T)
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue" 
## no colors provided. using the following legend:
##        0        1        2        4 
##  "black"    "red" "green3"   "blue"
colors = c("black", "red", "green3", "blue")
names(colors) = c("No bracts", "1", "2", "4")
nodelabels(pie=(describe.simmap(bracts_sim, plot=F)$ace) ,piecol=colors,cex=0.35)
add.simmap.legend(colors = colors, x=0.6*par()$usr[1],y=0.3*par()$usr[4],prompt=FALSE)

Ocean Depth Zones:

## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan" 
## no colors provided. using the following legend:
## Bathypelagic Deep benthic   Epipelagic  Mesopelagic      Surface 
##      "black"        "red"     "green3"       "blue"       "cyan"

Continuous traits: Brownian motion reconstructions

Median depth reconstruction:

Bathymetrics phylomorphospace

Abundance of each taxon in the Monterey Bay sampling site

Uncertainty inclusive traitgram for depth range

Bathymetrics scattergram array

## Computing multidimensional phylogenetic scatterplot matrix...

Distribution of sex across siphonophore taxa

Overview of main binary traits

Phylogenetic signal in the character data

Agnostic branch length tree generation

flat_tree = tree
flat_tree$edge.length = rep(mean(flat_tree$edge.length), length(flat_tree$edge.length))

Phylogenetic signal in bract number

phylosignal(bracts, ultratree)
##           K PIC.variance.obs PIC.variance.rnd.mean PIC.variance.P
## 1 0.8613105        0.9125646              1.472304          0.023
##   PIC.variance.Z
## 1      -1.187893
physignal(bracts, ultratree)
## 
  |                                                                       
  |                                                                 |   0%
  |                                                                       
  |                                                                 |   1%
  |                                                                       
  |=                                                                |   1%
  |                                                                       
  |=                                                                |   2%
  |                                                                       
  |==                                                               |   2%
  |                                                                       
  |==                                                               |   3%
  |                                                                       
  |==                                                               |   4%
  |                                                                       
  |===                                                              |   4%
  |                                                                       
  |===                                                              |   5%
  |                                                                       
  |====                                                             |   5%
  |                                                                       
  |====                                                             |   6%
  |                                                                       
  |====                                                             |   7%
  |                                                                       
  |=====                                                            |   7%
  |                                                                       
  |=====                                                            |   8%
  |                                                                       
  |======                                                           |   8%
  |                                                                       
  |======                                                           |   9%
  |                                                                       
  |======                                                           |  10%
  |                                                                       
  |=======                                                          |  10%
  |                                                                       
  |=======                                                          |  11%
  |                                                                       
  |=======                                                          |  12%
  |                                                                       
  |========                                                         |  12%
  |                                                                       
  |========                                                         |  13%
  |                                                                       
  |=========                                                        |  13%
  |                                                                       
  |=========                                                        |  14%
  |                                                                       
  |=========                                                        |  15%
  |                                                                       
  |==========                                                       |  15%
  |                                                                       
  |==========                                                       |  16%
  |                                                                       
  |===========                                                      |  16%
  |                                                                       
  |===========                                                      |  17%
  |                                                                       
  |===========                                                      |  18%
  |                                                                       
  |============                                                     |  18%
  |                                                                       
  |============                                                     |  19%
  |                                                                       
  |=============                                                    |  19%
  |                                                                       
  |=============                                                    |  20%
  |                                                                       
  |=============                                                    |  21%
  |                                                                       
  |==============                                                   |  21%
  |                                                                       
  |==============                                                   |  22%
  |                                                                       
  |===============                                                  |  22%
  |                                                                       
  |===============                                                  |  23%
  |                                                                       
  |===============                                                  |  24%
  |                                                                       
  |================                                                 |  24%
  |                                                                       
  |================                                                 |  25%
  |                                                                       
  |=================                                                |  25%
  |                                                                       
  |=================                                                |  26%
  |                                                                       
  |=================                                                |  27%
  |                                                                       
  |==================                                               |  27%
  |                                                                       
  |==================                                               |  28%
  |                                                                       
  |===================                                              |  28%
  |                                                                       
  |===================                                              |  29%
  |                                                                       
  |===================                                              |  30%
  |                                                                       
  |====================                                             |  30%
  |                                                                       
  |====================                                             |  31%
  |                                                                       
  |====================                                             |  32%
  |                                                                       
  |=====================                                            |  32%
  |                                                                       
  |=====================                                            |  33%
  |                                                                       
  |======================                                           |  33%
  |                                                                       
  |======================                                           |  34%
  |                                                                       
  |======================                                           |  35%
  |                                                                       
  |=======================                                          |  35%
  |                                                                       
  |=======================                                          |  36%
  |                                                                       
  |========================                                         |  36%
  |                                                                       
  |========================                                         |  37%
  |                                                                       
  |========================                                         |  38%
  |                                                                       
  |=========================                                        |  38%
  |                                                                       
  |=========================                                        |  39%
  |                                                                       
  |==========================                                       |  39%
  |                                                                       
  |==========================                                       |  40%
  |                                                                       
  |==========================                                       |  41%
  |                                                                       
  |===========================                                      |  41%
  |                                                                       
  |===========================                                      |  42%
  |                                                                       
  |============================                                     |  42%
  |                                                                       
  |============================                                     |  43%
  |                                                                       
  |============================                                     |  44%
  |                                                                       
  |=============================                                    |  44%
  |                                                                       
  |=============================                                    |  45%
  |                                                                       
  |==============================                                   |  45%
  |                                                                       
  |==============================                                   |  46%
  |                                                                       
  |==============================                                   |  47%
  |                                                                       
  |===============================                                  |  47%
  |                                                                       
  |===============================                                  |  48%
  |                                                                       
  |================================                                 |  48%
  |                                                                       
  |================================                                 |  49%
  |                                                                       
  |================================                                 |  50%
  |                                                                       
  |=================================                                |  50%
  |                                                                       
  |=================================                                |  51%
  |                                                                       
  |=================================                                |  52%
  |                                                                       
  |==================================                               |  52%
  |                                                                       
  |==================================                               |  53%
  |                                                                       
  |===================================                              |  53%
  |                                                                       
  |===================================                              |  54%
  |                                                                       
  |===================================                              |  55%
  |                                                                       
  |====================================                             |  55%
  |                                                                       
  |====================================                             |  56%
  |                                                                       
  |=====================================                            |  56%
  |                                                                       
  |=====================================                            |  57%
  |                                                                       
  |=====================================                            |  58%
  |                                                                       
  |======================================                           |  58%
  |                                                                       
  |======================================                           |  59%
  |                                                                       
  |=======================================                          |  59%
  |                                                                       
  |=======================================                          |  60%
  |                                                                       
  |=======================================                          |  61%
  |                                                                       
  |========================================                         |  61%
  |                                                                       
  |========================================                         |  62%
  |                                                                       
  |=========================================                        |  62%
  |                                                                       
  |=========================================                        |  63%
  |                                                                       
  |=========================================                        |  64%
  |                                                                       
  |==========================================                       |  64%
  |                                                                       
  |==========================================                       |  65%
  |                                                                       
  |===========================================                      |  65%
  |                                                                       
  |===========================================                      |  66%
  |                                                                       
  |===========================================                      |  67%
  |                                                                       
  |============================================                     |  67%
  |                                                                       
  |============================================                     |  68%
  |                                                                       
  |=============================================                    |  68%
  |                                                                       
  |=============================================                    |  69%
  |                                                                       
  |=============================================                    |  70%
  |                                                                       
  |==============================================                   |  70%
  |                                                                       
  |==============================================                   |  71%
  |                                                                       
  |==============================================                   |  72%
  |                                                                       
  |===============================================                  |  72%
  |                                                                       
  |===============================================                  |  73%
  |                                                                       
  |================================================                 |  73%
  |                                                                       
  |================================================                 |  74%
  |                                                                       
  |================================================                 |  75%
  |                                                                       
  |=================================================                |  75%
  |                                                                       
  |=================================================                |  76%
  |                                                                       
  |==================================================               |  76%
  |                                                                       
  |==================================================               |  77%
  |                                                                       
  |==================================================               |  78%
  |                                                                       
  |===================================================              |  78%
  |                                                                       
  |===================================================              |  79%
  |                                                                       
  |====================================================             |  79%
  |                                                                       
  |====================================================             |  80%
  |                                                                       
  |====================================================             |  81%
  |                                                                       
  |=====================================================            |  81%
  |                                                                       
  |=====================================================            |  82%
  |                                                                       
  |======================================================           |  82%
  |                                                                       
  |======================================================           |  83%
  |                                                                       
  |======================================================           |  84%
  |                                                                       
  |=======================================================          |  84%
  |                                                                       
  |=======================================================          |  85%
  |                                                                       
  |========================================================         |  85%
  |                                                                       
  |========================================================         |  86%
  |                                                                       
  |========================================================         |  87%
  |                                                                       
  |=========================================================        |  87%
  |                                                                       
  |=========================================================        |  88%
  |                                                                       
  |==========================================================       |  88%
  |                                                                       
  |==========================================================       |  89%
  |                                                                       
  |==========================================================       |  90%
  |                                                                       
  |===========================================================      |  90%
  |                                                                       
  |===========================================================      |  91%
  |                                                                       
  |===========================================================      |  92%
  |                                                                       
  |============================================================     |  92%
  |                                                                       
  |============================================================     |  93%
  |                                                                       
  |=============================================================    |  93%
  |                                                                       
  |=============================================================    |  94%
  |                                                                       
  |=============================================================    |  95%
  |                                                                       
  |==============================================================   |  95%
  |                                                                       
  |==============================================================   |  96%
  |                                                                       
  |===============================================================  |  96%
  |                                                                       
  |===============================================================  |  97%
  |                                                                       
  |===============================================================  |  98%
  |                                                                       
  |================================================================ |  98%
  |                                                                       
  |================================================================ |  99%
  |                                                                       
  |=================================================================|  99%
  |                                                                       
  |=================================================================| 100%
## 
## Call:
## physignal(A = bracts, phy = ultratree) 
## 
## 
## 
## Observed Phylogenetic Signal (K): 0.8613
## 
## P-value: 0.045
## 
## Based on 1000 random permutations

Phylogenetic signal in Nectosome, Palpons, Tentilla, and Pneumetophore

##                      K PIC.variance.obs PIC.variance.rnd.mean
## Nectosome     3.965198       0.03910808             0.1985638
## Palpons       3.114442       0.11036920             0.6811621
## Tentilla      2.654816       0.07987194             0.3561513
## Pneumatophore 3.473777       0.08726089             0.5991785
##               PIC.variance.P PIC.variance.Z
## Nectosome             0.0035      -2.450670
## Palpons               0.0010      -4.556984
## Tentilla              0.0010      -3.220126
## Pneumatophore         0.0010      -4.345324

Phylogenetic signal in VARS bathymetrics

## 
  |                                                                       
  |                                                                 |   0%
  |                                                                       
  |                                                                 |   1%
  |                                                                       
  |=                                                                |   1%
  |                                                                       
  |=                                                                |   2%
  |                                                                       
  |==                                                               |   2%
  |                                                                       
  |==                                                               |   3%
  |                                                                       
  |==                                                               |   4%
  |                                                                       
  |===                                                              |   4%
  |                                                                       
  |===                                                              |   5%
  |                                                                       
  |====                                                             |   5%
  |                                                                       
  |====                                                             |   6%
  |                                                                       
  |====                                                             |   7%
  |                                                                       
  |=====                                                            |   7%
  |                                                                       
  |=====                                                            |   8%
  |                                                                       
  |======                                                           |   8%
  |                                                                       
  |======                                                           |   9%
  |                                                                       
  |======                                                           |  10%
  |                                                                       
  |=======                                                          |  10%
  |                                                                       
  |=======                                                          |  11%
  |                                                                       
  |=======                                                          |  12%
  |                                                                       
  |========                                                         |  12%
  |                                                                       
  |========                                                         |  13%
  |                                                                       
  |=========                                                        |  13%
  |                                                                       
  |=========                                                        |  14%
  |                                                                       
  |=========                                                        |  15%
  |                                                                       
  |==========                                                       |  15%
  |                                                                       
  |==========                                                       |  16%
  |                                                                       
  |===========                                                      |  16%
  |                                                                       
  |===========                                                      |  17%
  |                                                                       
  |===========                                                      |  18%
  |                                                                       
  |============                                                     |  18%
  |                                                                       
  |============                                                     |  19%
  |                                                                       
  |=============                                                    |  19%
  |                                                                       
  |=============                                                    |  20%
  |                                                                       
  |=============                                                    |  21%
  |                                                                       
  |==============                                                   |  21%
  |                                                                       
  |==============                                                   |  22%
  |                                                                       
  |===============                                                  |  22%
  |                                                                       
  |===============                                                  |  23%
  |                                                                       
  |===============                                                  |  24%
  |                                                                       
  |================                                                 |  24%
  |                                                                       
  |================                                                 |  25%
  |                                                                       
  |=================                                                |  25%
  |                                                                       
  |=================                                                |  26%
  |                                                                       
  |=================                                                |  27%
  |                                                                       
  |==================                                               |  27%
  |                                                                       
  |==================                                               |  28%
  |                                                                       
  |===================                                              |  28%
  |                                                                       
  |===================                                              |  29%
  |                                                                       
  |===================                                              |  30%
  |                                                                       
  |====================                                             |  30%
  |                                                                       
  |====================                                             |  31%
  |                                                                       
  |====================                                             |  32%
  |                                                                       
  |=====================                                            |  32%
  |                                                                       
  |=====================                                            |  33%
  |                                                                       
  |======================                                           |  33%
  |                                                                       
  |======================                                           |  34%
  |                                                                       
  |======================                                           |  35%
  |                                                                       
  |=======================                                          |  35%
  |                                                                       
  |=======================                                          |  36%
  |                                                                       
  |========================                                         |  36%
  |                                                                       
  |========================                                         |  37%
  |                                                                       
  |========================                                         |  38%
  |                                                                       
  |=========================                                        |  38%
  |                                                                       
  |=========================                                        |  39%
  |                                                                       
  |==========================                                       |  39%
  |                                                                       
  |==========================                                       |  40%
  |                                                                       
  |==========================                                       |  41%
  |                                                                       
  |===========================                                      |  41%
  |                                                                       
  |===========================                                      |  42%
  |                                                                       
  |============================                                     |  42%
  |                                                                       
  |============================                                     |  43%
  |                                                                       
  |============================                                     |  44%
  |                                                                       
  |=============================                                    |  44%
  |                                                                       
  |=============================                                    |  45%
  |                                                                       
  |==============================                                   |  45%
  |                                                                       
  |==============================                                   |  46%
  |                                                                       
  |==============================                                   |  47%
  |                                                                       
  |===============================                                  |  47%
  |                                                                       
  |===============================                                  |  48%
  |                                                                       
  |================================                                 |  48%
  |                                                                       
  |================================                                 |  49%
  |                                                                       
  |================================                                 |  50%
  |                                                                       
  |=================================                                |  50%
  |                                                                       
  |=================================                                |  51%
  |                                                                       
  |=================================                                |  52%
  |                                                                       
  |==================================                               |  52%
  |                                                                       
  |==================================                               |  53%
  |                                                                       
  |===================================                              |  53%
  |                                                                       
  |===================================                              |  54%
  |                                                                       
  |===================================                              |  55%
  |                                                                       
  |====================================                             |  55%
  |                                                                       
  |====================================                             |  56%
  |                                                                       
  |=====================================                            |  56%
  |                                                                       
  |=====================================                            |  57%
  |                                                                       
  |=====================================                            |  58%
  |                                                                       
  |======================================                           |  58%
  |                                                                       
  |======================================                           |  59%
  |                                                                       
  |=======================================                          |  59%
  |                                                                       
  |=======================================                          |  60%
  |                                                                       
  |=======================================                          |  61%
  |                                                                       
  |========================================                         |  61%
  |                                                                       
  |========================================                         |  62%
  |                                                                       
  |=========================================                        |  62%
  |                                                                       
  |=========================================                        |  63%
  |                                                                       
  |=========================================                        |  64%
  |                                                                       
  |==========================================                       |  64%
  |                                                                       
  |==========================================                       |  65%
  |                                                                       
  |===========================================                      |  65%
  |                                                                       
  |===========================================                      |  66%
  |                                                                       
  |===========================================                      |  67%
  |                                                                       
  |============================================                     |  67%
  |                                                                       
  |============================================                     |  68%
  |                                                                       
  |=============================================                    |  68%
  |                                                                       
  |=============================================                    |  69%
  |                                                                       
  |=============================================                    |  70%
  |                                                                       
  |==============================================                   |  70%
  |                                                                       
  |==============================================                   |  71%
  |                                                                       
  |==============================================                   |  72%
  |                                                                       
  |===============================================                  |  72%
  |                                                                       
  |===============================================                  |  73%
  |                                                                       
  |================================================                 |  73%
  |                                                                       
  |================================================                 |  74%
  |                                                                       
  |================================================                 |  75%
  |                                                                       
  |=================================================                |  75%
  |                                                                       
  |=================================================                |  76%
  |                                                                       
  |==================================================               |  76%
  |                                                                       
  |==================================================               |  77%
  |                                                                       
  |==================================================               |  78%
  |                                                                       
  |===================================================              |  78%
  |                                                                       
  |===================================================              |  79%
  |                                                                       
  |====================================================             |  79%
  |                                                                       
  |====================================================             |  80%
  |                                                                       
  |====================================================             |  81%
  |                                                                       
  |=====================================================            |  81%
  |                                                                       
  |=====================================================            |  82%
  |                                                                       
  |======================================================           |  82%
  |                                                                       
  |======================================================           |  83%
  |                                                                       
  |======================================================           |  84%
  |                                                                       
  |=======================================================          |  84%
  |                                                                       
  |=======================================================          |  85%
  |                                                                       
  |========================================================         |  85%
  |                                                                       
  |========================================================         |  86%
  |                                                                       
  |========================================================         |  87%
  |                                                                       
  |=========================================================        |  87%
  |                                                                       
  |=========================================================        |  88%
  |                                                                       
  |==========================================================       |  88%
  |                                                                       
  |==========================================================       |  89%
  |                                                                       
  |==========================================================       |  90%
  |                                                                       
  |===========================================================      |  90%
  |                                                                       
  |===========================================================      |  91%
  |                                                                       
  |===========================================================      |  92%
  |                                                                       
  |============================================================     |  92%
  |                                                                       
  |============================================================     |  93%
  |                                                                       
  |=============================================================    |  93%
  |                                                                       
  |=============================================================    |  94%
  |                                                                       
  |=============================================================    |  95%
  |                                                                       
  |==============================================================   |  95%
  |                                                                       
  |==============================================================   |  96%
  |                                                                       
  |===============================================================  |  96%
  |                                                                       
  |===============================================================  |  97%
  |                                                                       
  |===============================================================  |  98%
  |                                                                       
  |================================================================ |  98%
  |                                                                       
  |================================================================ |  99%
  |                                                                       
  |=================================================================|  99%
  |                                                                       
  |=================================================================| 100%
## 
## Call:
## physignal(A = dpruned_data[, c(13, 14, 15, 17, 18)], phy = dpruned_tree) 
## 
## 
## 
## 
## Observed Phylogenetic Signal (K): 0.7039
## 
## P-value: 0.047
## 
## Based on 1000 random permutations
## 
  |                                                                       
  |                                                                 |   0%
  |                                                                       
  |                                                                 |   1%
  |                                                                       
  |=                                                                |   1%
  |                                                                       
  |=                                                                |   2%
  |                                                                       
  |==                                                               |   2%
  |                                                                       
  |==                                                               |   3%
  |                                                                       
  |==                                                               |   4%
  |                                                                       
  |===                                                              |   4%
  |                                                                       
  |===                                                              |   5%
  |                                                                       
  |====                                                             |   5%
  |                                                                       
  |====                                                             |   6%
  |                                                                       
  |====                                                             |   7%
  |                                                                       
  |=====                                                            |   7%
  |                                                                       
  |=====                                                            |   8%
  |                                                                       
  |======                                                           |   8%
  |                                                                       
  |======                                                           |   9%
  |                                                                       
  |======                                                           |  10%
  |                                                                       
  |=======                                                          |  10%
  |                                                                       
  |=======                                                          |  11%
  |                                                                       
  |=======                                                          |  12%
  |                                                                       
  |========                                                         |  12%
  |                                                                       
  |========                                                         |  13%
  |                                                                       
  |=========                                                        |  13%
  |                                                                       
  |=========                                                        |  14%
  |                                                                       
  |=========                                                        |  15%
  |                                                                       
  |==========                                                       |  15%
  |                                                                       
  |==========                                                       |  16%
  |                                                                       
  |===========                                                      |  16%
  |                                                                       
  |===========                                                      |  17%
  |                                                                       
  |===========                                                      |  18%
  |                                                                       
  |============                                                     |  18%
  |                                                                       
  |============                                                     |  19%
  |                                                                       
  |=============                                                    |  19%
  |                                                                       
  |=============                                                    |  20%
  |                                                                       
  |=============                                                    |  21%
  |                                                                       
  |==============                                                   |  21%
  |                                                                       
  |==============                                                   |  22%
  |                                                                       
  |===============                                                  |  22%
  |                                                                       
  |===============                                                  |  23%
  |                                                                       
  |===============                                                  |  24%
  |                                                                       
  |================                                                 |  24%
  |                                                                       
  |================                                                 |  25%
  |                                                                       
  |=================                                                |  25%
  |                                                                       
  |=================                                                |  26%
  |                                                                       
  |=================                                                |  27%
  |                                                                       
  |==================                                               |  27%
  |                                                                       
  |==================                                               |  28%
  |                                                                       
  |===================                                              |  28%
  |                                                                       
  |===================                                              |  29%
  |                                                                       
  |===================                                              |  30%
  |                                                                       
  |====================                                             |  30%
  |                                                                       
  |====================                                             |  31%
  |                                                                       
  |====================                                             |  32%
  |                                                                       
  |=====================                                            |  32%
  |                                                                       
  |=====================                                            |  33%
  |                                                                       
  |======================                                           |  33%
  |                                                                       
  |======================                                           |  34%
  |                                                                       
  |======================                                           |  35%
  |                                                                       
  |=======================                                          |  35%
  |                                                                       
  |=======================                                          |  36%
  |                                                                       
  |========================                                         |  36%
  |                                                                       
  |========================                                         |  37%
  |                                                                       
  |========================                                         |  38%
  |                                                                       
  |=========================                                        |  38%
  |                                                                       
  |=========================                                        |  39%
  |                                                                       
  |==========================                                       |  39%
  |                                                                       
  |==========================                                       |  40%
  |                                                                       
  |==========================                                       |  41%
  |                                                                       
  |===========================                                      |  41%
  |                                                                       
  |===========================                                      |  42%
  |                                                                       
  |============================                                     |  42%
  |                                                                       
  |============================                                     |  43%
  |                                                                       
  |============================                                     |  44%
  |                                                                       
  |=============================                                    |  44%
  |                                                                       
  |=============================                                    |  45%
  |                                                                       
  |==============================                                   |  45%
  |                                                                       
  |==============================                                   |  46%
  |                                                                       
  |==============================                                   |  47%
  |                                                                       
  |===============================                                  |  47%
  |                                                                       
  |===============================                                  |  48%
  |                                                                       
  |================================                                 |  48%
  |                                                                       
  |================================                                 |  49%
  |                                                                       
  |================================                                 |  50%
  |                                                                       
  |=================================                                |  50%
  |                                                                       
  |=================================                                |  51%
  |                                                                       
  |=================================                                |  52%
  |                                                                       
  |==================================                               |  52%
  |                                                                       
  |==================================                               |  53%
  |                                                                       
  |===================================                              |  53%
  |                                                                       
  |===================================                              |  54%
  |                                                                       
  |===================================                              |  55%
  |                                                                       
  |====================================                             |  55%
  |                                                                       
  |====================================                             |  56%
  |                                                                       
  |=====================================                            |  56%
  |                                                                       
  |=====================================                            |  57%
  |                                                                       
  |=====================================                            |  58%
  |                                                                       
  |======================================                           |  58%
  |                                                                       
  |======================================                           |  59%
  |                                                                       
  |=======================================                          |  59%
  |                                                                       
  |=======================================                          |  60%
  |                                                                       
  |=======================================                          |  61%
  |                                                                       
  |========================================                         |  61%
  |                                                                       
  |========================================                         |  62%
  |                                                                       
  |=========================================                        |  62%
  |                                                                       
  |=========================================                        |  63%
  |                                                                       
  |=========================================                        |  64%
  |                                                                       
  |==========================================                       |  64%
  |                                                                       
  |==========================================                       |  65%
  |                                                                       
  |===========================================                      |  65%
  |                                                                       
  |===========================================                      |  66%
  |                                                                       
  |===========================================                      |  67%
  |                                                                       
  |============================================                     |  67%
  |                                                                       
  |============================================                     |  68%
  |                                                                       
  |=============================================                    |  68%
  |                                                                       
  |=============================================                    |  69%
  |                                                                       
  |=============================================                    |  70%
  |                                                                       
  |==============================================                   |  70%
  |                                                                       
  |==============================================                   |  71%
  |                                                                       
  |==============================================                   |  72%
  |                                                                       
  |===============================================                  |  72%
  |                                                                       
  |===============================================                  |  73%
  |                                                                       
  |================================================                 |  73%
  |                                                                       
  |================================================                 |  74%
  |                                                                       
  |================================================                 |  75%
  |                                                                       
  |=================================================                |  75%
  |                                                                       
  |=================================================                |  76%
  |                                                                       
  |==================================================               |  76%
  |                                                                       
  |==================================================               |  77%
  |                                                                       
  |==================================================               |  78%
  |                                                                       
  |===================================================              |  78%
  |                                                                       
  |===================================================              |  79%
  |                                                                       
  |====================================================             |  79%
  |                                                                       
  |====================================================             |  80%
  |                                                                       
  |====================================================             |  81%
  |                                                                       
  |=====================================================            |  81%
  |                                                                       
  |=====================================================            |  82%
  |                                                                       
  |======================================================           |  82%
  |                                                                       
  |======================================================           |  83%
  |                                                                       
  |======================================================           |  84%
  |                                                                       
  |=======================================================          |  84%
  |                                                                       
  |=======================================================          |  85%
  |                                                                       
  |========================================================         |  85%
  |                                                                       
  |========================================================         |  86%
  |                                                                       
  |========================================================         |  87%
  |                                                                       
  |=========================================================        |  87%
  |                                                                       
  |=========================================================        |  88%
  |                                                                       
  |==========================================================       |  88%
  |                                                                       
  |==========================================================       |  89%
  |                                                                       
  |==========================================================       |  90%
  |                                                                       
  |===========================================================      |  90%
  |                                                                       
  |===========================================================      |  91%
  |                                                                       
  |===========================================================      |  92%
  |                                                                       
  |============================================================     |  92%
  |                                                                       
  |============================================================     |  93%
  |                                                                       
  |=============================================================    |  93%
  |                                                                       
  |=============================================================    |  94%
  |                                                                       
  |=============================================================    |  95%
  |                                                                       
  |==============================================================   |  95%
  |                                                                       
  |==============================================================   |  96%
  |                                                                       
  |===============================================================  |  96%
  |                                                                       
  |===============================================================  |  97%
  |                                                                       
  |===============================================================  |  98%
  |                                                                       
  |================================================================ |  98%
  |                                                                       
  |================================================================ |  99%
  |                                                                       
  |=================================================================|  99%
  |                                                                       
  |=================================================================| 100%
## 
## Call:
## physignal(A = depth_range, phy = dpruned_tree) 
## 
## 
## 
## Observed Phylogenetic Signal (K): 0.7504
## 
## P-value: 0.049
## 
## Based on 1000 random permutations
##                      K PIC.variance.obs PIC.variance.rnd.mean
## Depth.Median 0.7119254         785189.2             1142302.7
## Depth.Mean   0.6827270         896854.5             1238048.5
## Depth.StdDev 0.5649574         145636.6              161094.2
## Depth.Max    0.6888667        3252100.6             4310452.4
## Depth.Min    0.8189561         711003.2             1169181.0
##              PIC.variance.P PIC.variance.Z
## Depth.Median          0.089     -0.9532110
## Depth.Mean            0.102     -0.9049216
## Depth.StdDev          0.321     -0.4626376
## Depth.Max             0.096     -1.2230483
## Depth.Min             0.065     -1.0056433

Phylogenetic PCA for bathymetrics

Phylogenetic ANOVA for depth

Each phylogenetic ANOVA compares variance of depth (continuous variable) within and between groups clustered by their categorical biological traits.

## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.8801907
## 
## $Pf
## [1] 0.648
## 
## $T
##            Dorsal       None    Ventral
## Dorsal  0.0000000 -0.4051855 -1.2074648
## None    0.4051855  0.0000000 -0.6624153
## Ventral 1.2074648  0.6624153  0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##         Dorsal None Ventral
## Dorsal   1.000    1   0.939
## None     1.000    1   1.000
## Ventral  0.939    1   1.000
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 7.337818
## 
## $Pf
## [1] 0.132
## 
## $T
##            Dioeicous Monoeicous
## Dioeicous   0.000000   2.708841
## Monoeicous -2.708841   0.000000
## 
## $method
## [1] "holm"
## 
## $Pt
##            Dioeicous Monoeicous
## Dioeicous      1.000      0.132
## Monoeicous     0.132      1.000
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.2959558
## 
## $Pf
## [1] 0.742
## 
## $T
##           0          1
## 0 0.0000000 -0.5440182
## 1 0.5440182  0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##       0     1
## 0 1.000 0.742
## 1 0.742 1.000
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.2060374
## 
## $Pf
## [1] 0.967
## 
## $T
##                      Multiple of one type      None Two of one type
## Multiple of one type            0.0000000 0.6089965       0.5355092
## None                           -0.6089965 0.0000000      -0.1312674
## Two of one type                -0.5355092 0.1312674       0.0000000
## Two of two types               -0.3110835 0.2234348       0.1134931
##                      Two of two types
## Multiple of one type        0.3110835
## None                       -0.2234348
## Two of one type            -0.1134931
## Two of two types            0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##                      Multiple of one type None Two of one type
## Multiple of one type                    1    1               1
## None                                    1    1               1
## Two of one type                         1    1               1
## Two of two types                        1    1               1
##                      Two of two types
## Multiple of one type                1
## None                                1
## Two of one type                     1
## Two of two types                    1
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.02459673
## 
## $Pf
## [1] 0.919
## 
## $T
##            0         1
## 0  0.0000000 0.1568334
## 1 -0.1568334 0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##       0     1
## 0 1.000 0.919
## 1 0.919 1.000
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.2524332
## 
## $Pf
## [1] 0.793
## 
## $T
##           0          1
## 0 0.0000000 -0.5024273
## 1 0.5024273  0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##       0     1
## 0 1.000 0.793
## 1 0.793 1.000
## Warning: no labels for x. Assuming order of tree$tip.label.
## 
## Warning: no labels for y. Assuming order of tree$tip.label.
## $F
## [1] 0.2538955
## 
## $Pf
## [1] 0.773
## 
## $T
##           0          1
## 0 0.0000000 -0.5038804
## 1 0.5038804  0.0000000
## 
## $method
## [1] "holm"
## 
## $Pt
##       0     1
## 0 1.000 0.773
## 1 0.773 1.000